Lecture 2 - Atoms and Elements

 

1862-1870       Periodic table developed first by a geologist and mineralogist  Alexandre Beguyer de Chancourtois (1862), who published a list of all of the known elements in order of their atomic weights.  He also recognized that some elements had the same physical properties, thus introducing the idea of periodicity.  In 1868 Dmitri Mendeleev expanded on the idea that there was a periodic repetition of elements with similar physical and chemical properties.  Ex.   atoms numbered 3,11,19,37,55  (Li, Na, K, Rb, Cs) all soft, silvery white metals.  All these elements are reactive, and form perfect cubes when combined with chlorine.  The resulting compounds (LiCl, NaCl, KCl, RbCl and CsCl) are all colorless and display perfect cubic cleavage.  In fact, the symmetry of his table was so compelling that he recognized absence of elements where not yet discovered ...

 

1897 J.J. Thompson discovered electrons; soon after Rutherford recognized that atoms had a small nucleus composed of protons and neutrons (to explain charge and mass).

 

 

Bohr model of the atom: Bohr introduced the concept of energy levels, known as quantum numbers. He believed that these levels were arranged as spherical shells, a geometry now known to be too restrictive

 

 

 

 

 

SUMMARY OF QUANTUM NUMBERS

1. The principle quantum number (n) determines the major energy level.  n = 1-7, with each level also designated by a le to Q, with K (n=1) being the lowest energy level and Q (n=7) the highest.: K is equivalent to (n=1). When an electron moves from a higher energy level to a lower one, energy is released as electromagnetic radiation (usually x-rays); this forms the basis for many of our analytical techniques.  The maximum number of electrons allowed at any one level is 2n2.

 

2. The angular momentum quantum number (l) represents 'subshells' or orbitals, within each energy level.  l varies from 0 to n-1, with higher values of l corresponding to higher angular momentum.  The corresponding orbitals are s, p, d, and f for l = 0-3;  these may hold up to 2,6,10 and 14 electrons, respectively.  Electrons fill orbitals from lowest to highest energy. The outermost electrons are called the alence electrons

 

 

 

3. The magnetic quantum number (m) relates to the magnetic field generated by an electron with angular momentum and may be –1, 1

4. The spin quantum number relates to the intrinsic magnetism of the electron itself, and may be either -1/2 or +1/2

 

 

Modern periodic table

  1. Periods are rows; the number of the period indicates the orbitals occupied by electrons.  EX: elements in 1st period contain electrons in 1s orbital; elements in 2nd period have electrons in 2s and 2p orbitals; elements in 3rd period have electrons in 3s and 3p É  4th to 7th periods have 10 extra elements with electrons in d-orbitals.  6th and 7th periods have additional 14 elements with electrons in f-orbitals [listed separately at the bottom of the table É includes rare earth elements and actinide series]
  2. Groups -orbitals that are readily given up to produce cations.  Elements near the right hand side of the table have nearly full orbitals and thus easily acquire additional electrons; these elements become nions.  Properties of elements in the middle of the table (the transition elements) are less predictable.  Important groups are the alkalis (I), the alkali earths (II), the halogens (VII), and the transition elements (partially filled d- and f-orbitals, and therefore may have unpredictable behavior).

 

 

 

IONS

            Atoms are most stable if electrons completely fill energy levels and sublevels.  For this reason, many atoms will either give up or accept extra electrons in order to stabilize their configuration, thereby creating ions.  The number of electrons gained or lost is referred to as the valence, or valence state. The process of losing an electron is called oxidation, while gaining an electron is reduction. When one or more electrons are lost from the electron configuration of the atom, a cation is formed. When electrons are added, an anion is formed.

Energy required to removed the most weakly held electron is known as the first ionization potential.   Note that the noble (inert) elements have the highest ionization energy, while the alkalis (row 1 of the periodic table) have the lowest.  However, a more common measure is that of the ability of an atom in a crystal structure or molecule to attract electrons to its outer shell - calculated from known bonds strengths, and known as electronegativity (concept developed by Pauling).  Atoms with different electronegativity form ionic bonds with one another, and elements of periodic table can be divided into two groups, electron donors (the metals, in the left-hand side of the periodic table) and electron acceptors (the nonmetals, on the righthand side of the periodic table). Elements with similar electronegativities form covalent bonds (C). Additionally, several elements are found in more than one valence state.  EX: Fe can occur in a divalent state  Fe2+ (ferrous iron) or Fe3+ (ferric iron).

Sizes of ions

            Anions are formed when atoms gain 1 or more electrons

            Cations are formed when atoms lose 1 or more electrons

Anions are thus generally larger than cations, and crystal structures can be envisaged as large spheres packed around small spheres in such a way that the space between spheres is minimized, and positive and negative charges are balanced.  Thus the chemical classification system that we use is based primarily on the anion or anion group.

 

Atomic number and mass

            Atomic number is the number of protons in an element's nucleus (Z) and, in a neutral atom, is also equal to the number of electrons.  It is also close to the number of electrons in most ions.  Most important in controlling elemental properties.

            Atomic mass (A) is the number of protons (Z) + number of neutrons (N).  Most elements have several different isotopes (same Z different N).  Although chemists don't worry much about isotopes, very important in geology as climate tracers and for radioactive dating of geologic materials.

            A mole of an element is defined as the amount of that element that has its weight in grams equal to its atomic weight.  Given by Avogadro's number (N): one mole of an element or compound always has 6.022 x 1023 atoms. 

 

EX: Box 1.2     What is a mole of quartz?

            SiO2 = 28.0855 + 2(15.994) = 60.0843 grams

 

Bonding in minerals

            A chemical bond exists when the forces acting between two elements are sufficient to form a new aggregate or molecule.  There are four primary types of chemical bonds:

            Covalent bonds involve shared electrons in outer shell; this means that an electron pair occupies two different orbitals simultaneously; such bonds are directional because of this orbital control.  Covalent bonds are strong (diamond) and molecules with these bonds tend to be electrical insulators.

            Ionic Metallic bonds are al'>acteristic of native metals, which are elements that easily lose their outer electrons.  In a metal there are more bond sites (empty orbitals) than there are electron pairs to fill them. Detached electrons mover freely through the structure, thus metals are good electrical conductors.

            Van der Waals; not important in most minerals (except graphite).

           

Type of bonding in minerals determines both the symmetry and the physical properties of minerals;  the most important bond in many minerals that we will examine is the Si-O bond, which is partly ionic and partly covalent (called polar covalent); directionality of covalent part of bond is preserved.

 

 

Effects of size

            As important as valence state is the relative size of the two ions (ionic radius), which dictates their separation.  Note that the attractive force increases as the atoms approach each other, with a maximum when they are just touching.  As soon as their electron clouds overlap, repulsive forces become strong (counteracts attractive energy).  The minimum energy configuration occurs where the distance between centers of ions is equal to the sum of their ionic radii (closest packing).